If you get pro tools it can be done with the dinr plug in.
Digidesign Intelligent Noise Reduction Plug-In
DINR is the award-winning Digidesign Intelligent Noise Reduction Plug-In for real-time, high-quality reduction of both broadband and pitched noise. As a software-based, digital signal processing module designed to reduce the full spectrum of unwanted noise -- from air-conditioner rumble to tape hiss to guitar-amp buzz -- DINR intelligently cleans up your tracks for more professional sounding audio.
One technique is to use DINR in an 'inverted' configuration. Instead of isolating the noise floor below threshold and subtracting it, one removes noise peaks above threshold. This is done by moving the threshold curser line up to include all the audio, and attenuate to infinity - the result is silence. Then, by bringing the threshold down at specific frequencies, you can select only the sound peaks you want removed. You should be auditioning only the unwanted audio, no subtle music below the noise peak should be showing through. Now switch in the 'audition noise' feature - remember the 'noise' is the music, now minus the bits you want to remove. This works spectacularly for pops, bumps, rumbles, and as a brickwall filter.