Oh, I can totally understand that -- change things just a little bit and you can change the sound.
I've run a V3 for years, but have only run a V2 a couple of times, so I can't really comment on whether they have a different sound. I just don't think it wa any conscious decision by Grace to lessen the quality of the V3's preamp section to make room costwise to add an A/D section. I think it was just the reality of needing to move manufacturing towards surface mount (which by the way should reduce stray board capacitances and actually improve the sound, if anything) and need to move to a new inamp since the original was discontinued.