Another, albeit slightly more complex approach, is to sync the head of the entire recording, then go to the tail end, and sync the tail by stretching one of the tracks. The stretch needed will be very small, maybe a second or two, which with a good editor will automatically be pitch corrected, and remember, you're spreading one second out over an hour or more of time, so the stretching isn't even noticeable. This way, you can get both sources completely synced over the entire recording in one shot, then track out as normal, with no "weird" stuff inbetween. Also, like said above, you need to delay the SBD not only watch out for being in-phase b/w the two sources, but ALSO LISTEN for phasing between the two sources even when they are in phase. I've found it's actually preferable to NOT get the two sources completely perfectly synced visually because you can easily hear the phasiness coming in/out. I find it more consistently sounds better to let the SBD run a few ms earlier than the aud, just enough so they don't produce and phasiness, but still close enough to remove the echo completely. Good luck, and just USE YOUR EARS!