ok the left channel is in average 3dB higher.
But i have the same difference monitoring the laptop integrated audio.
With the apogee i have that -87 -90 floor, with the audio i have a -46 -49...
tested on different computer: it has the same 3dB difference: nothing changes when i trim the "CAL/LINE" trimmers.
More, the Left channel volume oscillates in a larger range than the right: if i try to pair the peaks of the two channels, the Left remains always jumps more.